AT2G04390


Description : Ribosomal S17 family protein


Gene families : OG_01_0002410 (Gene family) Phylogenetic Tree(s): OG0002410_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G04390
Cluster HCCA cluster: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034653001 No alias 29.2.1.2.1.17 protein.synthesis.ribosomal... 0.02 Gene family
LOC_Os03g01900 Os03g0109500 29.2.1.2.1.17 protein.synthesis.ribosomal... 0.02 Gene family
LOC_Os10g27190 Os10g0411800 29.2.1.2.1.17 protein.synthesis.ribosomal... 0.03 Gene family
Solyc05g055230.2.1 Solyc05g055230.2 29.2.1.2.1.17 protein.synthesis.ribosomal... 0.03 Gene family
Solyc10g083165.1.1 Solyc10g083165.1 29.2.1.2.1.17 protein.synthesis.ribosomal... 0.04 Gene family
Solyc11g006690.1.1 Solyc11g006690.1 29.2.1.2.1.17 protein.synthesis.ribosomal... 0.06 Gene family
Zm00001d037111 GRMZM2G073150 29.2.1.2.1.17 protein.synthesis.ribosomal... 0.04 Gene family
Zm00001d045000 GRMZM2G086906 29.2.1.2.1.17 protein.synthesis.ribosomal... 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0000028 ribosomal small subunit assembly IBA Arabidopsis.org
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
BP GO:0006414 translational elongation IBA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 116
No external refs found!