Nbi_g15418


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g15418

Target Alias Description ECC score Gene Family Method Actions
Aev_g18205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37861 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01500 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03430 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g03717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45318.t1 Aspi01Gene45318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.06 OrthoFinder output from all 47 species
Ceric.01G115200.1 Ceric.01G115200 not classified & original description: pacid=50591005... 0.04 OrthoFinder output from all 47 species
Ceric.02G071100.1 Ceric.02G071100 not classified & original description: pacid=50585515... 0.04 OrthoFinder output from all 47 species
Ceric.03G029700.1 Ceric.03G029700 not classified & original description: pacid=50572783... 0.04 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.04 OrthoFinder output from all 47 species
Ceric.14G013800.1 Ceric.14G013800 not classified & original description: pacid=50633719... 0.05 OrthoFinder output from all 47 species
Ceric.18G008700.1 Ceric.18G008700 not classified & original description: pacid=50621984... 0.05 OrthoFinder output from all 47 species
Ceric.34G030900.1 Ceric.34G030900 not classified & original description: pacid=50623489... 0.04 OrthoFinder output from all 47 species
Dac_g05475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45418 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g38858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g53630.1 LOC_Os04g53630 Pentatricopeptide repeat-containing protein At3g20730... 0.02 OrthoFinder output from all 47 species
Len_g40128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54960 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_9258g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g07729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g18814 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g21591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33298 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc01g081560.2.1 Solyc01g081560 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g06827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e041987_P001 Zm00001e041987 Pentatricopeptide repeat-containing protein At2g37320... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 255 277
IPR002885 Pentatricopeptide_repeat 153 175
IPR002885 Pentatricopeptide_repeat 51 71
IPR002885 Pentatricopeptide_repeat 281 327
IPR002885 Pentatricopeptide_repeat 179 226
IPR002885 Pentatricopeptide_repeat 77 123
IPR002885 Pentatricopeptide_repeat 384 430
No external refs found!