AT2G01130


Description : DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0000624 (Gene family) Phylogenetic Tree(s): OG0000624_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G01130
Cluster HCCA cluster: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cre03.g171650 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.01 Gene family
GSVIVT01023271001 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.04 Gene family
LOC_Os04g35260 Os04g0432200,... 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.02 Gene family
Solyc01g006710.3.1 Solyc01g006710.3 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.05 Gene family
Solyc01g006970.3.1 Solyc01g006970.3 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.04 Gene family
Solyc03g118920.3.1 Solyc03g118920.3 28.99 DNA.unspecified DEA(D/H)-box RNA helicase family protein 0.02 Gene family
Zm00001d032735 GRMZM2G399212 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Arabidopsis.org
MF GO:0004386 helicase activity ISS Arabidopsis.org
MF GO:0005524 ATP binding ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 681 767
IPR011545 DEAD/DEAH_box_helicase_dom 228 380
IPR014720 dsRBD_dom 1025 1087
IPR011709 DUF1605 837 918
IPR001650 Helicase_C 487 617
No external refs found!