AT1G80580


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G80580
Cluster HCCA cluster: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 Gene family
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 Gene family
GSVIVT01017542001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
GSVIVT01030515001 No alias No description available 0.04 Gene family
GSVIVT01032785001 No alias No description available 0.03 Gene family
LOC_Os07g42510 Os07g0617000 No description available 0.03 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.02 Gene family
MA_30120g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_37932g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_502153g0010 No alias No description available 0.03 Gene family
MA_65985g0010 No alias No description available 0.02 Gene family
Smo38494 PACid_15415269 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Smo73155 PACid_15404551 No description available 0.02 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.06 Gene family
Solyc03g117230.1.1 Solyc03g117230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Solyc05g013540.1.1 Solyc05g013540.1 No description available 0.06 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.03 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.02 Gene family
Zm00001d010676 GRMZM2G066158 No description available 0.03 Gene family
Zm00001d012584 GRMZM2G132223 No description available 0.03 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.07 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d038216 GRMZM2G481668 No description available 0.04 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.03 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.03 Gene family
Zm00001d043204 GRMZM2G002119 No description available 0.03 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity TAS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009873 ethylene-activated signaling pathway TAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 115 164
No external refs found!