MA_6597368g0010


Description : VPS46/CHMP1 associated protein of ESCRT-III complex


Gene families : OG_01_0002047 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002047_tree ,
OG_02_0002010 (LandPlants) Phylogenetic Tree(s): OG_02_0002010_tree ,
OG_03_0002531 (SeedPlants) Phylogenetic Tree(s): OG_03_0002531_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6597368g0010
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT1G73030 CHMP1A, VPS46.2 SNF7 family protein 0.04 Archaeplastida
Cpa|evm.model.tig00020554.72 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
Cre03.g188500 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
Gb_40149 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.05 Archaeplastida
Zm00001e037486_P001 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 Archaeplastida
AMTR_s00036p00206680 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 LandPlants
AT1G73030 CHMP1A, VPS46.2 SNF7 family protein 0.04 LandPlants
Gb_30102 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.01 LandPlants
Gb_40149 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.05 LandPlants
Zm00001e037486_P001 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 LandPlants
AMTR_s00036p00206680 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 SeedPlants
AT1G73030 CHMP1A, VPS46.2 SNF7 family protein 0.04 SeedPlants
Gb_30102 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.01 SeedPlants
Gb_40149 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.05 SeedPlants
Zm00001e037486_P001 No alias VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005024 Snf7_fam 12 175
No external refs found!