AT1G80150


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000772 (Gene family) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G80150
Cluster HCCA cluster: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017298001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os01g57630 Os01g0785700 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os02g42210 Os02g0633200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_137206g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc02g079830.1.1 Solyc02g079830.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc05g012257.1.1 Solyc05g012257.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 176 224
IPR002885 Pentatricopeptide_repeat 311 339
IPR002885 Pentatricopeptide_repeat 112 137
No external refs found!