AT1G79280 (NUA, AtTPR)


Aliases : NUA, AtTPR

Description : nuclear pore anchor


Gene families : OG_01_0004562 (Gene family) Phylogenetic Tree(s): OG0004562_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G79280
Cluster HCCA cluster: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000404.46 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.05 Gene family
GSVIVT01036698001 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.19 Gene family
LOC_Os02g50799 Os02g0741500 33.99 development.unspecified Encodes a 237-kDA protein... 0.09 Gene family
MA_10435343g0040 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.06 Gene family
MA_113769g0010 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.03 Gene family
MA_33097g0010 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.02 Gene family
MA_929786g0010 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.03 Gene family
Smo444132 PACid_15414409 33.99 development.unspecified Encodes a 237-kDA protein... 0.04 Gene family
Solyc06g053590.3.1 Solyc06g053590.3 33.99 development.unspecified Encodes a 237-kDA protein... 0.14 Gene family
Zm00001d052282 GRMZM2G439339 33.99 development.unspecified Encodes a 237-kDA protein... 0.16 Gene family

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005635 nuclear envelope IDA Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
BP GO:0009910 negative regulation of flower development IMP Arabidopsis.org
BP GO:0016973 poly(A)+ mRNA export from nucleus IMP Arabidopsis.org
BP GO:0033234 negative regulation of protein sumoylation IMP Arabidopsis.org
BP GO:0048443 stamen development IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012929 TPR/MLP1 1045 1171
No external refs found!