AT1G78080 (RAP2.4)


Aliases : RAP2.4

Description : related to AP2 4


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G78080
Cluster HCCA cluster: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.03 Gene family
Cre08.g364400 No alias No description available 0.01 Gene family
GSVIVT01013903001 No alias No description available 0.03 Gene family
GSVIVT01016684001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
GSVIVT01035098001 No alias No description available 0.03 Gene family
LOC_Os01g12440 Os01g0224100 No description available 0.04 Gene family
LOC_Os02g51670 Os02g0752800 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os05g25260 Os05g0316800 No description available 0.02 Gene family
LOC_Os07g22770 Os07g0410700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os07g42510 Os07g0617000 No description available 0.03 Gene family
LOC_Os08g31580 Os08g0408500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.06 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_4032g0010 No alias No description available 0.03 Gene family
MA_81029g0010 No alias No description available 0.04 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.04 Gene family
Solyc02g090770.1.1 Solyc02g090770.1 No description available 0.02 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.03 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.02 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.05 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.04 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027870 GRMZM2G419901 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Arabidopsis.org
MF GO:0003677 DNA binding TAS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity IDA Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity TAS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005634 nucleus IC Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0006970 response to osmotic stress IEP Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
BP GO:0009414 response to water deprivation IMP Arabidopsis.org
BP GO:0009414 response to water deprivation IEP Arabidopsis.org
BP GO:0009416 response to light stimulus IEP Arabidopsis.org
BP GO:0009611 response to wounding IEP Arabidopsis.org
BP GO:0009651 response to salt stress IEP Arabidopsis.org
BP GO:0009736 cytokinin-activated signaling pathway IMP Arabidopsis.org
BP GO:0009873 ethylene-activated signaling pathway IMP Arabidopsis.org
BP GO:0010017 red or far-red light signaling pathway IGI Arabidopsis.org
MF GO:0043565 sequence-specific DNA binding IDA Arabidopsis.org
BP GO:0045595 regulation of cell differentiation IMP Arabidopsis.org
BP GO:0071472 cellular response to salt stress IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 152 200
No external refs found!