AT1G77440 (PBC2)

Aliases : PBC2

Description : 20S proteasome beta subunit C2

Gene families : OG_01_0002888 (Gene family) Phylogenetic Tree(s): OG0002888_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G77440
Cluster HCCA cluster: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Cre06.g267500 No alias protein.degradation.ubiquitin.proteasom 20S... 0.09 Gene family
GSVIVT01008836001 No alias protein.degradation.ubiquitin.proteasom 20S... 0.07 Gene family
Solyc04g009410.3.1 Solyc04g009410.3 protein.degradation.ubiquitin.proteasom 20S... 0.04 Gene family
Zm00001d036758 GRMZM2G045371 protein.degradation.ubiquitin.proteasom 20S... 0.05 Gene family
Zm00001d046600 GRMZM2G092975 protein.degradation.ubiquitin.proteasom 20S... 0.06 Gene family

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA
CC GO:0005737 cytoplasm ISM
CC GO:0005839 proteasome core complex TAS
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS
BP GO:0006635 fatty acid beta-oxidation RCA
MF GO:0008233 peptidase activity ISS
BP GO:0009640 photomorphogenesis RCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA
BP GO:0043248 proteasome assembly RCA
BP GO:0051788 response to misfolded protein RCA
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 189
No external refs found!