AT1G77440 (PBC2)


Aliases : PBC2

Description : 20S proteasome beta subunit C2


Gene families : OG_01_0002888 (Gene family) Phylogenetic Tree(s): OG0002888_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G77440
Cluster HCCA cluster: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Cre06.g267500 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom 20S... 0.09 Gene family
GSVIVT01008836001 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom 20S... 0.07 Gene family
Solyc04g009410.3.1 Solyc04g009410.3 29.5.11.20 protein.degradation.ubiquitin.proteasom 20S... 0.04 Gene family
Zm00001d036758 GRMZM2G045371 29.5.11.20 protein.degradation.ubiquitin.proteasom 20S... 0.05 Gene family
Zm00001d046600 GRMZM2G092975 29.5.11.20 protein.degradation.ubiquitin.proteasom 20S... 0.06 Gene family

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005839 proteasome core complex TAS Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Arabidopsis.org
BP GO:0006635 fatty acid beta-oxidation RCA Arabidopsis.org
MF GO:0008233 peptidase activity ISS Arabidopsis.org
BP GO:0009640 photomorphogenesis RCA Arabidopsis.org
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Arabidopsis.org
BP GO:0043248 proteasome assembly RCA Arabidopsis.org
BP GO:0051788 response to misfolded protein RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 189
No external refs found!