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  5. MA_651027g0010

MA_651027g0010


Description : alpha-class expansin


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0000028 (LandPlants) Phylogenetic Tree(s): OG_02_0000028_tree ,
OG_03_0000041 (SeedPlants) Phylogenetic Tree(s): OG_03_0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_651027g0010
Cluster HCCA: Cluster_428

Target Alias Description ECC score Gene Family Method Actions
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.04 Archaeplastida
GSVIVT01007987001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01016525001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16780.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g28890.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp4g22180.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c14_18040V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c22_760V3.1 No alias expansin A1 0.03 Archaeplastida
Smo102623 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.08 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004721_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.04 Archaeplastida
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.02 LandPlants
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 LandPlants
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 LandPlants
GSVIVT01007987001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
GSVIVT01014362001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
GSVIVT01016525001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
LOC_Os01g16770.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os02g16780.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os03g06000.1 No alias alpha-class expansin 0.02 LandPlants
MA_14588g0010 No alias alpha-class expansin 0.04 LandPlants
MA_18265g0010 No alias alpha-class expansin 0.04 LandPlants
Smo102623 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Solyc12g089380.2.1 No alias alpha-class expansin 0.03 LandPlants
Zm00001e000429_P001 No alias alpha-class expansin 0.04 LandPlants
Zm00001e017334_P001 No alias alpha-class expansin 0.03 LandPlants
Zm00001e038997_P001 No alias alpha-class expansin 0.02 LandPlants
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 SeedPlants
GSVIVT01014362001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 SeedPlants
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 SeedPlants
LOC_Os01g14650.1 No alias alpha-class expansin 0.01 SeedPlants
LOC_Os06g50400.1 No alias alpha-class expansin 0.02 SeedPlants
MA_14588g0010 No alias alpha-class expansin 0.03 SeedPlants
MA_18265g0010 No alias alpha-class expansin 0.03 SeedPlants
Solyc12g089380.2.1 No alias alpha-class expansin 0.03 SeedPlants
Zm00001e000429_P001 No alias alpha-class expansin 0.02 SeedPlants
Zm00001e017334_P001 No alias alpha-class expansin 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 164 242
IPR009009 RlpA-like_DPBB 64 153
No external refs found!