MA_648837g0010


Description : pectin methylesterase


Gene families : OG_01_0000046 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000046_tree ,
OG_02_0000020 (LandPlants) Phylogenetic Tree(s): OG_02_0000020_tree ,
OG_03_0000014 (SeedPlants) Phylogenetic Tree(s): OG_03_0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_648837g0010
Cluster HCCA: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00044320 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.06 Archaeplastida
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G10710 RHS12 root hair specific 12 0.05 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.07 Archaeplastida
AT3G59010 PME61 pectin methylesterase 61 0.04 Archaeplastida
AT4G02300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.03 Archaeplastida
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01027359001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
GSVIVT01035108001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Gb_01422 No alias pectin methylesterase 0.02 Archaeplastida
Gb_03174 No alias pectin methylesterase 0.04 Archaeplastida
Gb_06354 No alias pectin methylesterase 0.03 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.03 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.05 Archaeplastida
Gb_24214 No alias pectin methylesterase 0.03 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.04 Archaeplastida
Gb_28387 No alias pectin methylesterase 0.04 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os01g13320.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g21034.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os03g18860.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os04g38560.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os05g29790.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os06g09340.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os08g34900.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os08g34910.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os11g36240.1 No alias pectin methylesterase 0.05 Archaeplastida
MA_10332149g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10372207g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_10435891g0010 No alias pectin methylesterase 0.05 Archaeplastida
MA_161148g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_18093g0010 No alias Pectinesterase 2.1 OS=Solanum lycopersicum... 0.03 Archaeplastida
MA_2253g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_74624g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_84680g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_931259g0010 No alias pectin methylesterase 0.1 Archaeplastida
MA_96515g0010 No alias pectin methylesterase 0.05 Archaeplastida
Mp8g00060.1 No alias pectin methylesterase 0.04 Archaeplastida
Mp8g09330.1 No alias pectin methylesterase 0.03 Archaeplastida
Pp3c10_1100V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.05 Archaeplastida
Pp3c18_22120V3.1 No alias pectin methylesterase PCR fragment F 0.02 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.07 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
Pp3c2_35260V3.1 No alias pectin methylesterase 3 0.03 Archaeplastida
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Smo83744 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Smo89509 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc01g057220.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc01g098940.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc01g099950.1.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.07 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g080220.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.07 Archaeplastida
Solyc03g123620.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc06g009180.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc07g017600.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e004056_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009863_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e011069_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e017515_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e034231_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e041006_P001 No alias pectin methylesterase 0.02 Archaeplastida
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 LandPlants
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 LandPlants
AMTR_s00129p00074780 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 LandPlants
AT1G11580 ATPMEPCRA, PMEPCRA methylesterase PCR A 0.02 LandPlants
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.03 LandPlants
AT1G53840 PME1, ATPME1 pectin methylesterase 1 0.02 LandPlants
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT3G10710 RHS12 root hair specific 12 0.04 LandPlants
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 LandPlants
AT3G59010 PME61 pectin methylesterase 61 0.03 LandPlants
AT4G02300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.02 LandPlants
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 LandPlants
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.02 LandPlants
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
Gb_01422 No alias pectin methylesterase 0.02 LandPlants
Gb_03174 No alias pectin methylesterase 0.04 LandPlants
Gb_06354 No alias pectin methylesterase 0.03 LandPlants
Gb_10523 No alias pectin methylesterase 0.03 LandPlants
Gb_21388 No alias pectin methylesterase 0.05 LandPlants
Gb_24214 No alias pectin methylesterase 0.03 LandPlants
Gb_25439 No alias pectin methylesterase 0.04 LandPlants
Gb_28387 No alias pectin methylesterase 0.02 LandPlants
Gb_35881 No alias pectin methylesterase 0.04 LandPlants
LOC_Os01g21034.1 No alias pectin methylesterase 0.05 LandPlants
LOC_Os02g54190.1 No alias pectin methylesterase 0.05 LandPlants
LOC_Os06g09340.1 No alias pectin methylesterase 0.02 LandPlants
LOC_Os07g47830.1 No alias pectin methylesterase 0.04 LandPlants
LOC_Os11g07090.1 No alias pectin methylesterase 0.02 LandPlants
LOC_Os11g36240.1 No alias pectin methylesterase 0.04 LandPlants
MA_10332149g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_10372207g0010 No alias pectin methylesterase 0.03 LandPlants
MA_10435891g0010 No alias pectin methylesterase 0.05 LandPlants
MA_18093g0010 No alias Pectinesterase 2.1 OS=Solanum lycopersicum... 0.03 LandPlants
MA_26888g0010 No alias no hits & (original description: none) 0.07 LandPlants
MA_84680g0010 No alias pectin methylesterase 0.02 LandPlants
MA_931259g0010 No alias pectin methylesterase 0.06 LandPlants
MA_96515g0010 No alias pectin methylesterase 0.04 LandPlants
Mp8g00060.1 No alias pectin methylesterase 0.02 LandPlants
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 LandPlants
Smo89509 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 LandPlants
Solyc01g057220.3.1 No alias pectin methylesterase 0.02 LandPlants
Solyc01g091050.4.1 No alias pectin methylesterase 0.03 LandPlants
Solyc01g098940.3.1 No alias pectin methylesterase 0.03 LandPlants
Solyc01g099950.1.1 No alias pectin methylesterase 0.03 LandPlants
Solyc02g014300.2.1 No alias pectin methylesterase 0.06 LandPlants
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.03 LandPlants
Solyc02g080220.3.1 No alias pectin methylesterase 0.02 LandPlants
Solyc02g081990.3.1 No alias pectin methylesterase 0.02 LandPlants
Solyc03g083840.3.1 No alias pectin methylesterase 0.03 LandPlants
Solyc03g083870.4.1 No alias pectin methylesterase 0.06 LandPlants
Solyc03g123620.4.1 No alias pectin methylesterase 0.02 LandPlants
Solyc06g009180.3.1 No alias pectin methylesterase 0.03 LandPlants
Solyc07g017600.3.1 No alias pectin methylesterase 0.02 LandPlants
Solyc09g075350.4.1 No alias pectin methylesterase 0.03 LandPlants
Zm00001e011069_P001 No alias pectin methylesterase 0.02 LandPlants
Zm00001e017515_P001 No alias pectin methylesterase 0.03 LandPlants
Zm00001e026790_P001 No alias pectin methylesterase 0.03 LandPlants
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AMTR_s00129p00047530 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 SeedPlants
AT1G11580 ATPMEPCRA, PMEPCRA methylesterase PCR A 0.01 SeedPlants
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.02 SeedPlants
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 SeedPlants
AT3G10710 RHS12 root hair specific 12 0.03 SeedPlants
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 SeedPlants
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 SeedPlants
AT3G59010 PME61 pectin methylesterase 61 0.02 SeedPlants
AT4G33230 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 SeedPlants
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 SeedPlants
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 SeedPlants
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
Gb_03174 No alias pectin methylesterase 0.02 SeedPlants
Gb_10523 No alias pectin methylesterase 0.03 SeedPlants
Gb_25439 No alias pectin methylesterase 0.03 SeedPlants
Gb_28387 No alias pectin methylesterase 0.02 SeedPlants
Gb_35881 No alias pectin methylesterase 0.03 SeedPlants
LOC_Os01g21034.1 No alias pectin methylesterase 0.04 SeedPlants
LOC_Os02g54190.1 No alias pectin methylesterase 0.04 SeedPlants
LOC_Os06g09340.1 No alias pectin methylesterase 0.01 SeedPlants
MA_10332149g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_26888g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_84680g0010 No alias pectin methylesterase 0.02 SeedPlants
MA_931259g0010 No alias pectin methylesterase 0.03 SeedPlants
MA_96515g0010 No alias pectin methylesterase 0.03 SeedPlants
Solyc01g057220.3.1 No alias pectin methylesterase 0.01 SeedPlants
Solyc01g098940.3.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc01g099950.1.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc02g014300.2.1 No alias pectin methylesterase 0.04 SeedPlants
Solyc02g081990.3.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc03g083870.4.1 No alias pectin methylesterase 0.04 SeedPlants
Solyc03g123620.4.1 No alias pectin methylesterase 0.01 SeedPlants
Solyc07g017600.3.1 No alias pectin methylesterase 0.01 SeedPlants
Solyc07g064190.3.1 No alias pectin methylesterase 0.01 SeedPlants
Solyc09g075350.4.1 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e011069_P001 No alias pectin methylesterase 0.02 SeedPlants
Zm00001e017515_P001 No alias pectin methylesterase 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 79 218
IPR000070 Pectinesterase_cat 1 78
No external refs found!