AT1G76160 (sks5)


Aliases : sks5

Description : SKU5 similar 5


Gene families : OG_01_0000406 (Gene family) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G76160
Cluster HCCA cluster: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AT1G41830 SKS6 SKU5-similar 6 0.04 Gene family
AT3G13390 sks11 SKU5 similar 11 0.04 Gene family
AT3G13400 sks13 SKU5 similar 13 0.04 Gene family
AT4G22010 sks4 SKU5 similar 4 0.03 Gene family
GSVIVT01030441001 No alias 35.1 not assigned.no ontology SKU5 similar 5 (sks5) 0.04 Gene family
LOC_Os01g60080 Os01g0816700 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.02 Gene family
LOC_Os05g40740 Os05g0485800 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.04 Gene family
LOC_Os07g32660 Os07g0510833,... 35.1 not assigned.no ontology SKU5 similar 5 (sks5) 0.03 Gene family
MA_10254g0020 No alias 26.7 misc.oxidases - copper, flavone etc SKU5 similar 4 (sks4) 0.03 Gene family
Smo229918 PACid_15414478 No description available 0.04 Gene family
Smo410532 PACid_15406387 No description available 0.03 Gene family
Solyc01g005510.3.1 Solyc01g005510.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.03 Gene family
Solyc01g056310.3.1 Solyc01g056310.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 12 (sks12) 0.04 Gene family
Solyc02g065170.3.1 Solyc02g065170.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 17 (sks17) 0.08 Gene family
Solyc03g063150.3.1 Solyc03g063150.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 12 (sks12) 0.03 Gene family
Solyc04g082140.3.1 Solyc04g082140.3 35.1 not assigned.no ontology SKU5 similar 5 (sks5) 0.04 Gene family
Solyc05g055710.3.1 Solyc05g055710.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 12 (sks12) 0.03 Gene family
Zm00001d012524 GRMZM2G068682 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.03 Gene family
Zm00001d018696 GRMZM2G043301 26.7 misc.oxidases - copper, flavone etc SKU5 similar 17 (sks17) 0.02 Gene family
Zm00001d038521 GRMZM2G129064 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.06 Gene family
Zm00001d043090 GRMZM2G157929 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.05 Gene family

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Arabidopsis.org
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0009505 plant-type cell wall IDA Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0016126 sterol biosynthetic process RCA Arabidopsis.org
CC GO:0048046 apoplast IDA Arabidopsis.org
BP GO:0052541 plant-type cell wall cellulose metabolic process RCA Arabidopsis.org
BP GO:0052546 cell wall pectin metabolic process RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 34 147
IPR011706 Cu-oxidase_2 377 513
IPR001117 Cu-oxidase 160 295
No external refs found!