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  5. Nbi_g14706

Nbi_g14706


Description : component *(CHL-N) of light-independent protochlorophyllide oxidoreductase complex & original description: none


Gene families : OG0029831 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0029831_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g14706
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Als_g16005 No alias component *(CHL-N) of light-independent... 0.08 OrthoFinder output from all 39 species
Aob_g04376 No alias component *(CHL-N) of light-independent... 0.03 OrthoFinder output from all 39 species
Aop_g13034 No alias component *(CHL-N) of light-independent... 0.04 OrthoFinder output from all 39 species
Cba_g17368 No alias component *(CHL-N) of light-independent... 0.05 OrthoFinder output from all 39 species
Dcu_g20880 No alias component *(CHL-N) of light-independent... 0.06 OrthoFinder output from all 39 species
Ppi_g03803 No alias component *(CHL-N) of light-independent... 0.06 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000510 Nase/OxRdtase_comp1 34 423
No external refs found!