AT1G09660

Description : RNA-binding KH domain-containing protein

Gene families : OG_01_0001008 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001008_tree ,
OG_02_0000848 (LandPlants) Phylogenetic Tree(s): OG_02_0000848_tree ,
OG_03_0001767 (SeedPlants) Phylogenetic Tree(s): OG_03_0001767_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G09660
Cluster	HCCA: Cluster_256

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g60260.2	No alias	KH domain-containing protein SPIN1 OS=Oryza sativa...	0.06	Archaeplastida
Zm00001e019459_P001	No alias	KH domain-containing protein SPIN1 OS=Oryza sativa...	0.02	Archaeplastida
LOC_Os01g60260.2	No alias	KH domain-containing protein SPIN1 OS=Oryza sativa...	0.06	LandPlants
Zm00001e019459_P001	No alias	KH domain-containing protein SPIN1 OS=Oryza sativa...	0.02	LandPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032377	STAR_dimer	41	79

External Links

No external refs found!