AT1G73410 (MYB54, ATMYB54)


Aliases : MYB54, ATMYB54

Description : myb domain protein 54


Gene families : OG_01_0000044 (Gene family) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G73410
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.03 Gene family
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.03 Gene family
AT5G11050 MYB64, AtMYB64 myb domain protein 64 0.03 Gene family
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.02 Gene family
Cpa|evm.model.tig00000663.2 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.01 Gene family
GSVIVT01008484001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.05 Gene family
GSVIVT01010006001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.08 Gene family
GSVIVT01026481001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os03g51110 Os03g0720800 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
MA_30848g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Smo6091 PACid_15418738 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc04g079360.1.1 Solyc04g079360.1 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc07g053230.3.1 Solyc07g053230.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:2000652 regulation of secondary cell wall biogenesis IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 58 101
IPR001005 SANT/Myb 6 51
No external refs found!