AT1G09520


Description : LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).


Gene families : OG_01_0007400 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007400_tree ,
OG_02_0005438 (LandPlants) Phylogenetic Tree(s): OG_02_0005438_tree ,
OG_03_0003914 (SeedPlants) Phylogenetic Tree(s): OG_03_0003914_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G09520
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g19620.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g101160.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g19620.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc01g101160.2.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os05g19620.1 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc01g101160.2.1 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!