MA_635039g0010


Description : subfamily ABCB transporter


Gene families : OG_01_0000057 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000057_tree ,
OG_02_0006080 (LandPlants) Phylogenetic Tree(s): OG_02_0006080_tree ,
OG_03_0004873 (SeedPlants) Phylogenetic Tree(s): OG_03_0004873_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_635039g0010
Cluster HCCA: Cluster_381

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00109940 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT1G28010 ABCB14, ATABCB14, PGP14 P-glycoprotein 14 0.03 Archaeplastida
AT3G28360 PGP16 P-glycoprotein 16 0.03 Archaeplastida
LOC_Os01g50100.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
LOC_Os01g50160.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os02g46680.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_83806g0010 No alias subfamily ABCB transporter 0.04 Archaeplastida
Mp3g11830.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.01 Archaeplastida
Pp3c17_16450V3.1 No alias ATP binding cassette subfamily B19 0.01 Archaeplastida
Pp3c1_7215V3.1 No alias ATP binding cassette subfamily B19 0.02 Archaeplastida
Smo99885 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Solyc11g067310.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 2 130
IPR003439 ABC_transporter-like 210 358
No external refs found!