AT1G71450


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G71450
Cluster HCCA cluster: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
Cpa|evm.model.tig00000984.2 No alias No description available 0.01 Gene family
GSVIVT01013905001 No alias No description available 0.02 Gene family
GSVIVT01013918001 No alias No description available 0.02 Gene family
GSVIVT01013923001 No alias No description available 0.02 Gene family
GSVIVT01013929001 No alias No description available 0.02 Gene family
GSVIVT01013931001 No alias No description available 0.02 Gene family
GSVIVT01013934001 No alias No description available 0.02 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01035911001 No alias No description available 0.02 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.03 Gene family
MA_10433094g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_164803g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_18454g0020 No alias No description available 0.04 Gene family
MA_502153g0010 No alias No description available 0.03 Gene family
MA_5530g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_66969g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.03 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.02 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.03 Gene family
Solyc02g093130.2.1 Solyc02g093130.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.02 Gene family
Solyc04g014530.1.1 Solyc04g014530.1 No description available 0.04 Gene family
Solyc04g051360.3.1 Solyc04g051360.3 No description available 0.05 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g072900.1.1 Solyc04g072900.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.03 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.02 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc11g042580.1.1 Solyc11g042580.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.02 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d002747 GRMZM2G028969 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d018191 GRMZM2G021369 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.03 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d037165 GRMZM2G084264 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 23 72
No external refs found!