MA_6335g0010


Description : E3 ubiquitin ligase (PUB)


Gene families : OG_01_0000112 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000112_tree ,
OG_02_0000097 (LandPlants) Phylogenetic Tree(s): OG_02_0000097_tree ,
OG_03_0004101 (SeedPlants) Phylogenetic Tree(s): OG_03_0004101_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6335g0010
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00130440 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00043p00215340 evm_27.TU.AmTr_v1... U-box domain-containing protein 8 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G66160 CMPG1, ATCMPG1 CYS, MET, PRO, and GLY protein 1 0.02 Archaeplastida
AT2G35930 PUB23 plant U-box 23 0.03 Archaeplastida
AT3G02840 No alias ARM repeat superfamily protein 0.04 Archaeplastida
AT3G52450 PUB22 plant U-box 22 0.03 Archaeplastida
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.05 Archaeplastida
Cre15.g635750 No alias No description available 0.02 Archaeplastida
GSVIVT01007048001 No alias U-box domain-containing protein 30 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01011139001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01011140001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01011616001 No alias U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_02629 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.03 Archaeplastida
Gb_16228 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 Archaeplastida
Gb_19502 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g64570.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g13740.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os04g58920.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g13870.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os08g04470.1 No alias U-box domain-containing protein 8 OS=Arabidopsis... 0.08 Archaeplastida
MA_10430196g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 Archaeplastida
MA_126399g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.04 Archaeplastida
MA_17715g0010 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.03 Archaeplastida
MA_209202g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 Archaeplastida
MA_311559g0010 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 Archaeplastida
MA_84154g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g06090.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Mp3g22740.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.07 Archaeplastida
Mp7g11000.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.06 Archaeplastida
Solyc01g005160.4.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 Archaeplastida
Solyc01g007000.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g007010.2.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007020.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g007030.3.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g007040.4.1 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007050.3.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g009330.1.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g107980.3.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.02 Archaeplastida
Solyc06g074140.1.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g006030.1.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g068920.1.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g068940.1.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e007108_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e007109_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e014752_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e014766_P001 No alias E3 ubiquitin ligase (PUB) 0.05 Archaeplastida
Zm00001e015491_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e015763_P001 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e038657_P001 No alias U-box domain-containing protein 75 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e040854_P001 No alias U-box domain-containing protein 29 OS=Arabidopsis... 0.03 Archaeplastida
AMTR_s00138p00053700 evm_27.TU.AmTr_v1... U-box domain-containing protein 21 OS=Arabidopsis thaliana 0.02 LandPlants
AT3G02840 No alias ARM repeat superfamily protein 0.02 LandPlants
AT3G52450 PUB22 plant U-box 22 0.02 LandPlants
GSVIVT01011616001 No alias U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.02 LandPlants
Gb_16228 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 LandPlants
Gb_19502 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 LandPlants
LOC_Os01g64570.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 LandPlants
LOC_Os03g13740.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.04 LandPlants
LOC_Os04g58920.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 LandPlants
LOC_Os06g13870.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 LandPlants
LOC_Os10g03440.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.02 LandPlants
MA_10430196g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 LandPlants
MA_126399g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.04 LandPlants
MA_17715g0010 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.03 LandPlants
MA_209202g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.03 LandPlants
MA_311559g0010 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 LandPlants
MA_84154g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.02 LandPlants
Mp2g06090.1 No alias E3 ubiquitin ligase (PUB) 0.02 LandPlants
Mp7g11000.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.04 LandPlants
Mp7g11020.1 No alias E3 ubiquitin ligase (PUB) 0.01 LandPlants
Pp3c19_3920V3.1 No alias plant U-box 23 0.01 LandPlants
Smo172230 No alias U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.02 LandPlants
Solyc01g005160.4.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 LandPlants
Solyc01g007000.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 LandPlants
Solyc01g007010.2.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 LandPlants
Solyc01g007020.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 LandPlants
Solyc01g007030.3.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 LandPlants
Solyc01g007040.4.1 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 LandPlants
Solyc01g007050.3.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.02 LandPlants
Solyc01g107980.3.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.02 LandPlants
Solyc06g074140.1.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.04 LandPlants
Solyc11g006030.1.1 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 LandPlants
Solyc11g068920.1.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 LandPlants
Solyc11g068940.1.1 No alias E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.04 LandPlants
Zm00001e000999_P001 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.02 LandPlants
Zm00001e007109_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 LandPlants
Zm00001e014752_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 LandPlants
Zm00001e014766_P001 No alias E3 ubiquitin ligase (PUB) 0.05 LandPlants
Zm00001e015491_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 LandPlants
Zm00001e015763_P001 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 LandPlants
Zm00001e039417_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 LandPlants
Zm00001e040854_P001 No alias U-box domain-containing protein 29 OS=Arabidopsis... 0.02 LandPlants
AMTR_s00030p00130440 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 SeedPlants
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.02 SeedPlants
LOC_Os04g34140.1 No alias E3 ubiquitin ligase (PUB) 0.01 SeedPlants
Solyc04g071030.1.1 No alias E3 ubiquitin ligase (PUB) 0.01 SeedPlants
Zm00001e014766_P001 No alias E3 ubiquitin ligase (PUB) 0.02 SeedPlants
Zm00001e040854_P001 No alias U-box domain-containing protein 29 OS=Arabidopsis... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 10 80
No external refs found!