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  5. Nbi_g14253

Nbi_g14253


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g14253

Target Alias Description ECC score Gene Family Method Actions
Adi_g004507 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10247 No alias EC_4.1 carbon-carbon lyase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g18164 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001379 SAMDC EC_4.1 carbon-carbon lyase & original description: CDS=1-2412 0.03 OrthoFinder output from all 47 species
Gb_35976 No alias S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
MA_10434945g0010 SAMDC S-adenosyl methionine decarboxylase 0.05 OrthoFinder output from all 47 species
MA_10434945g0020 SAMDC S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
MA_9879049g0010 SAMDC S-adenosyl methionine decarboxylase 0.05 OrthoFinder output from all 47 species
Msp_g27068 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g18523 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g089610.2.1 Solyc02g089610 S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
Solyc05g010420.2.1 Solyc05g010420 S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Spa_g14593 No alias ornithine decarboxylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38466 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034834_P001 Zm00001e034834 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 24 352
IPR022644 De-COase2_N 443 618
No external refs found!