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  5. Nbi_g14245

Nbi_g14245 (OEC33, PSBO-2, PSBO2)


Aliases : OEC33, PSBO-2, PSBO2

Description : component *(PsbO/OEC33) of PS-II oxygen-evolving center & original description: none


Gene families : OG0004183 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0004183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g14245
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Ala_g32349 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.07 OrthoFinder output from all 39 species
Als_g07877 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.03 OrthoFinder output from all 39 species
Aop_g08907 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.12 OrthoFinder output from all 39 species
Azfi_s0043.g026946 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.05 OrthoFinder output from all 39 species
Cba_g21919 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.05 OrthoFinder output from all 39 species
Ceric.13G017600.1 OEC33, PSBO-2,... component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.08 OrthoFinder output from all 39 species
Dac_g07616 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.14 OrthoFinder output from all 39 species
Dac_g07617 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.15 OrthoFinder output from all 39 species
Dcu_g15120 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.02 OrthoFinder output from all 39 species
Dcu_g15121 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.02 OrthoFinder output from all 39 species
Dde_g14744 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.08 OrthoFinder output from all 39 species
Len_g09570 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.08 OrthoFinder output from all 39 species
Msp_g11725 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.11 OrthoFinder output from all 39 species
Pir_g09358 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.12 OrthoFinder output from all 39 species
Pir_g10514 No alias not classified & original description: none 0.09 OrthoFinder output from all 39 species
Ppi_g42655 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.07 OrthoFinder output from all 39 species
Ppi_g59838 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.05 OrthoFinder output from all 39 species
Sacu_v1.1_s0063.g015767 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.03 OrthoFinder output from all 39 species
Sam_g09800 No alias component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.07 OrthoFinder output from all 39 species
Spa_g02826 OEC33, PSBO-2, PSBO2 not classified & original description: none 0.08 OrthoFinder output from all 39 species
Spa_g06494 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.13 OrthoFinder output from all 39 species
Spa_g18854 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.15 OrthoFinder output from all 39 species
Spa_g32035 No alias not classified & original description: none 0.13 OrthoFinder output from all 39 species
Spa_g53717 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.08 OrthoFinder output from all 39 species
Tin_g03846 OEC33, PSBO-2, PSBO2 component *(PsbO/OEC33) of PS-II oxygen-evolving center... 0.14 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0010207 photosystem II assembly IEA Interproscan
MF GO:0010242 oxygen evolving activity IEA Interproscan
BP GO:0042549 photosystem II stabilization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR002628 PSII_MSP 99 332
No external refs found!