Aliases : LPA3
Description : protein involved in PS-II assembly *(LPA3) & original description: none
Gene families : OG0005820 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005820_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00044p00143330 | LPA3,... | Photosynthesis.photophosphorylation.photosystem... | 0.09 | OrthoFinder output from all 47 species | |
AT1G73060 | LPA3 | Low PSII Accumulation 3 | 0.06 | OrthoFinder output from all 47 species | |
Adi_g021642 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g01102 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g08359 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g10058 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.1 | OrthoFinder output from all 47 species | |
Azfi_s0472.g072941 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.06 | OrthoFinder output from all 47 species | |
Cba_g08348 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.04G069900.1 | LPA3, Ceric.04G069900 | protein involved in PS-II assembly *(LPA3) & original... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000792.24 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g184550 | LPA3 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g17623 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g14491 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g15282 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01015969001 | LPA3 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g02520.1 | LPA3, LOC_Os02g02520 | LPA3 protein involved in PS-II assembly | 0.05 | OrthoFinder output from all 47 species | |
Len_g30874 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05945 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g18310.1 | LPA3 | LPA3 protein involved in PS-II assembly | 0.02 | OrthoFinder output from all 47 species | |
Msp_g19975 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g06511 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g01323 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g20972 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g02119 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.09 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0023.g008847 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.08 | OrthoFinder output from all 47 species | |
Sam_g19563 | No alias | protein involved in PS-II assembly *(LPA3) & original... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g19564 | No alias | protein involved in PS-II assembly *(LPA3) & original... | 0.03 | OrthoFinder output from all 47 species | |
Smo166238 | LPA3 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g068480.3.1 | LPA3, Solyc06g068480 | LPA3 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species | |
Spa_g01721 | LPA3 | protein involved in PS-II assembly *(LPA3) & original... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e013465_P002 | LPA3, Zm00001e013465 | LPA3 protein involved in PS-II assembly | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
BP | GO:0017038 | protein import | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR018962 | DUF1995 | 82 | 344 |
No external refs found! |