Nbi_g14112

Description : component *(HRD3) of ER-associated protein degradation (ERAD) machinery & original description: none

Gene families : OG0003345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003345_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g14112
Cluster	HCCA: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
Ala_g07807	No alias	component *(HRD3) of ER-associated protein degradation...	0.03	OrthoFinder output from all 47 species
Mp5g11590.1	No alias	component HRD3 of ER-associated protein degradation...	0.02	OrthoFinder output from all 47 species
Pir_g16119	No alias	component *(HRD3) of ER-associated protein degradation...	0.03	OrthoFinder output from all 47 species
Smo118981	No alias	Protein degradation.ER-associated protein degradation...	0.02	OrthoFinder output from all 47 species
Zm00001e001114_P001	Zm00001e001114	component HRD3 of ER-associated protein degradation...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006597	Sel1-like	398	432
IPR006597	Sel1-like	169	204
IPR006597	Sel1-like	585	615
IPR006597	Sel1-like	288	323
IPR006597	Sel1-like	325	356
IPR006597	Sel1-like	361	396
IPR006597	Sel1-like	433	467
IPR006597	Sel1-like	482	500
IPR006597	Sel1-like	551	572

External Links

No external refs found!