AT1G67750


Description : Pectate lyase family protein


Gene families : OG_01_0000238 (Gene family) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G67750
Cluster HCCA cluster: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G14420 AT59 Pectate lyase family protein 0.02 Gene family
AT2G02720 No alias Pectate lyase family protein 0.03 Gene family
AT3G24670 No alias Pectin lyase-like superfamily protein 0.02 Gene family
AT5G15110 No alias Pectate lyase family protein 0.02 Gene family
AT5G63180 No alias Pectin lyase-like superfamily protein 0.05 Gene family
GSVIVT01016208001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
GSVIVT01029048001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
LOC_Os06g05209 Os06g0144200 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
LOC_Os06g05260 Os06g0144900 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
LOC_Os06g05272 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
LOC_Os06g38510 Os06g0583900 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
MA_103716g0010 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Solyc02g067450.3.1 Solyc02g067450.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc02g093580.3.1 Solyc02g093580.3 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Solyc03g071570.3.1 Solyc03g071570.3 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Solyc03g113150.3.1 Solyc03g113150.3 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Zm00001d000216 GRMZM2G323418 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d004448 GRMZM2G131912 10.6.3 cell wall.degradation.pectate lyases and... 0.12 Gene family
Zm00001d025067 GRMZM2G412207 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
Zm00001d032806 GRMZM2G472060 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
Zm00001d036158 GRMZM2G364349 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Arabidopsis.org
MF GO:0030570 pectate lyase activity ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 141 325
No external refs found!