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  5. Nbi_g13956

Nbi_g13956 (AUD1, UXS2, ATUXS2)


Aliases : AUD1, UXS2, ATUXS2

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13956

Target Alias Description ECC score Gene Family Method Actions
Aob_g42489 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0198.g057434 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: CDS=1-822 0.03 OrthoFinder output from all 47 species
Cba_g17249 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03666 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17737 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11590 ATUXS3, UXS3 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_15630V3.1 AUD1, UXS2,... NAD(P)-binding Rossmann-fold superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g01069 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00942 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017527_P003 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species
Zm00001e019359_P001 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 130 425
No external refs found!