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  5. Nbi_g13948

Nbi_g13948


Description : clade E phosphatase & original description: none


Gene families : OG0000149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13948

Target Alias Description ECC score Gene Family Method Actions
AT1G79630 No alias Protein phosphatase 2C family protein 0.03 OrthoFinder output from all 47 species
Aev_g09847 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17915 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01008 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09749 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12111 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020839 No alias clade E phosphatase & original description: CDS=1-1134 0.03 OrthoFinder output from all 47 species
Sam_g12577 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g065700.3.1 Solyc01g065700 clade E phosphatase 0.02 OrthoFinder output from all 47 species
Solyc08g065670.4.1 Solyc08g065670 clade E phosphatase 0.05 OrthoFinder output from all 47 species
Spa_g31165 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33668 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g35289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024929_P002 Zm00001e024929 clade E phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 139 341
No external refs found!