Aliases : ARF16
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00198750 | ARF19, IAA22,... | RNA biosynthesis.transcriptional activation.B3... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00155p00082980 | ARF16,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AT5G60450 | ARF4 | auxin response factor 4 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g011925 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g059116 | ARF6 | transcriptional repressor *(IAA/AUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g080414 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g20559 | ARF10 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g33091 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g07961 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene02982.t1 | ARF6, Aspi01Gene02982 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.18G034300.1 | ARF16, Ceric.18G034300 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g17078 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g12286 | ARF10 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g18587 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01003591001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01035204001 | ARF8, ATARF8 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01035205001 | ARF8, ATARF8 | Auxin response factor 12 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
Gb_32864 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g33940.1 | ARF16, LOC_Os10g33940 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Len_g14660 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g30364 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_2237g0020 | ARF16 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Msp_g13825 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g15165 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g29453 | ARF1 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g41869 | ARF17 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g25925 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0084.g018261 | TIR5, MSG1,... | not classified & original description: CDS=484-2670 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g04406 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16405 | No alias | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g40110 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo181406 | ARF6 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g016180.3.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e013639_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0043531 | ADP binding | IEP | HCCA |
No external refs found! |