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Nbi_g13855 (UPL6)


Aliases : UPL6

Description : E3 ubiquitin ligase *(UPL6) & original description: none


Gene families : OG0002061 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0002061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13855

Target Alias Description ECC score Gene Family Method Actions
Als_g62754 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.01 OrthoFinder output from all 39 species
Ceric.05G020700.1 UPL6, Ceric.05G020700 E3 ubiquitin ligase *(UPL6) & original description:... 0.01 OrthoFinder output from all 39 species
Dde_g15093 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 39 species
Len_g14362 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g08600 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 39 species
Ppi_g05330 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 39 species
Sacu_v1.1_s0058.g014924 UPL6 E3 ubiquitin ligase *(UPL6) & original description: CDS=293-3301 0.01 OrthoFinder output from all 39 species
Tin_g13531 UPL6 E3 ubiquiTin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 740 1046
No external refs found!