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Nbi_g13855 (UPL6)


Aliases : UPL6

Description : E3 ubiquitin ligase *(UPL6) & original description: none


Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13855

Target Alias Description ECC score Gene Family Method Actions
AT3G53090 UPL7 ubiquitin-protein ligase 7 0.03 OrthoFinder output from all 47 species
Ala_g11314 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20441 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z062300.1 UPL7, Ceric.1Z062300 E3 ubiquitin ligase *(UPL6) & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os03g47949.1 UPL7, LOC_Os03g47949 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Solyc01g057900.3.1 UPL6, Solyc01g057900 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Tin_g13531 UPL6 E3 ubiquiTin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031128_P003 UPL6, Zm00001e031128 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 740 1046
No external refs found!