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  5. Nbi_g13845

Nbi_g13845 (ATML1)


Aliases : ATML1

Description : HD-ZIP IV-type transcription factor & original description: none


Gene families : OG0005984 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0005984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13845
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Ala_g25555 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 39 species
Aop_g09754 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 39 species
Dac_g03815 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 39 species
Dde_g39944 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g08965 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g16174 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g51145 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 39 species
Tin_g11470 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 39 species
Tin_g13777 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 39 species
Tin_g26986 No alias HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 113 168
IPR002913 START_lipid-bd_dom 304 525
No external refs found!