MA_61945g0010


Description : alpha-class expansin


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0000028 (LandPlants) Phylogenetic Tree(s): OG_02_0000028_tree ,
OG_03_0000041 (SeedPlants) Phylogenetic Tree(s): OG_03_0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_61945g0010
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.03 Archaeplastida
Gb_09118 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os03g06040.1 No alias alpha-class expansin 0.08 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g10160.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g12280.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp4g22180.1 No alias alpha-class expansin 0.01 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.01 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo78615 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.02 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.01 LandPlants
AT1G62980 EXPA18, EXP18,... expansin A18 0.02 LandPlants
Gb_09118 No alias alpha-class expansin 0.06 LandPlants
LOC_Os03g06040.1 No alias alpha-class expansin 0.08 LandPlants
LOC_Os03g25990.1 No alias alpha-class expansin 0.01 LandPlants
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 LandPlants
Smo78615 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
Solyc05g052250.3.1 No alias alpha-class expansin 0.01 LandPlants
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.02 LandPlants
Solyc08g080060.4.1 No alias alpha-class expansin 0.02 LandPlants
Solyc09g010860.4.1 No alias alpha-class expansin 0.01 LandPlants
Zm00001e004714_P001 No alias alpha-class expansin 0.02 LandPlants
Zm00001e038997_P001 No alias alpha-class expansin 0.01 LandPlants
LOC_Os03g06040.1 No alias alpha-class expansin 0.08 SeedPlants
LOC_Os03g60720.1 No alias alpha-class expansin 0.01 SeedPlants
LOC_Os05g39990.1 No alias alpha-class expansin 0.01 SeedPlants
Solyc05g052250.3.1 No alias alpha-class expansin 0.01 SeedPlants
Zm00001e004714_P001 No alias alpha-class expansin 0.02 SeedPlants
Zm00001e038997_P001 No alias alpha-class expansin 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 217 293
IPR009009 RlpA-like_DPBB 121 205
No external refs found!