Nbi_g13808


Description : not classified & original description: none


Gene families : OG0006946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006946_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13808
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00075230 evm_27.TU.AmTr_v1... Protein Iojap, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g042550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08821 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g09443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g65901 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.20G007700.1 Ceric.20G007700 not classified & original description: pacid=50567004... 0.06 OrthoFinder output from all 47 species
Dcu_g02409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020411001 No alias Protein Iojap, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os09g32030.1 LOC_Os09g32030 Protein Iojap, chloroplastic OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Len_g07700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09714 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_32740g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g04320.1 No alias Protein Iojap, chloroplastic OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Pir_g09339 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004683 No alias not classified & original description: CDS=335-1009 0.03 OrthoFinder output from all 47 species
Solyc07g066460.3.1 Solyc07g066460 Protein Iojap, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g53876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034562_P001 Zm00001e034562 Protein Iojap, chloroplastic OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!