AMTR_s00007p00212750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.194

Description : RNA biosynthesis.transcriptional activation.OFP transcription factor


Gene families : OG_01_0000130 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000130_tree ,
OG_02_0000050 (LandPlants) Phylogenetic Tree(s): OG_02_0000050_tree ,
OG_03_0000120 (SeedPlants) Phylogenetic Tree(s): OG_03_0000120_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00212750
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00234860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.06 Archaeplastida
AT1G06920 OFP4, ATOFP4 ovate family protein 4 0.04 Archaeplastida
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.04 Archaeplastida
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.02 Archaeplastida
GSVIVT01017105001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
GSVIVT01030204001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.08 Archaeplastida
GSVIVT01034649001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
LOC_Os02g45620.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os03g06350.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os04g37510.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os04g58820.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.05 Archaeplastida
MA_134006g0010 No alias transcription factor (OFP) 0.03 Archaeplastida
Solyc03g034100.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e000448_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e000779_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019186_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e025928_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e039401_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e041973_P001 No alias transcription factor (OFP) 0.05 Archaeplastida
AT1G06920 OFP4, ATOFP4 ovate family protein 4 0.04 LandPlants
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.04 LandPlants
GSVIVT01017105001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.03 LandPlants
GSVIVT01030204001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.04 LandPlants
GSVIVT01034649001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.03 LandPlants
LOC_Os02g45620.1 No alias transcription factor (OFP) 0.03 LandPlants
LOC_Os04g37510.1 No alias transcription factor (OFP) 0.03 LandPlants
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.05 LandPlants
LOC_Os05g44090.1 No alias transcription factor (OFP) 0.02 LandPlants
MA_134006g0010 No alias transcription factor (OFP) 0.03 LandPlants
MA_31710g0010 No alias transcription factor (OFP) 0.02 LandPlants
Mp3g18940.1 No alias transcription factor (OFP) 0.01 LandPlants
Solyc03g034100.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e000779_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e019186_P001 No alias transcription factor (OFP) 0.03 LandPlants
Zm00001e019432_P001 No alias transcription factor (OFP) 0.02 LandPlants
Zm00001e041973_P001 No alias transcription factor (OFP) 0.05 LandPlants
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.03 SeedPlants
LOC_Os04g37510.1 No alias transcription factor (OFP) 0.03 SeedPlants
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.02 SeedPlants
Zm00001e026867_P001 No alias No annotation 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025830 DNA_bnd_dom_ovate 1 45
IPR006458 Ovate_C 290 346
No external refs found!