AT1G08830 (CSD1)


Aliases : CSD1

Description : copper/zinc superoxide dismutase 1


Gene families : OG_01_0001915 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001915_tree ,
OG_02_0001502 (LandPlants) Phylogenetic Tree(s): OG_02_0001502_tree ,
OG_03_0001577 (SeedPlants) Phylogenetic Tree(s): OG_03_0001577_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G08830
Cluster HCCA: Cluster_443

Target Alias Description ECC score Gene Family Method Actions
Gb_38962 No alias copper/zinc superoxide dismutase 0.04 Archaeplastida
Smo442405 No alias Redox homeostasis.enzymatic reactive oxygen species... 0.07 Archaeplastida
Solyc01g067740.3.1 No alias copper/zinc superoxide dismutase 0.07 Archaeplastida
Gb_38962 No alias copper/zinc superoxide dismutase 0.04 LandPlants
Solyc01g067740.3.1 No alias copper/zinc superoxide dismutase 0.07 LandPlants
Gb_38962 No alias copper/zinc superoxide dismutase 0.04 SeedPlants
Solyc01g067740.3.1 No alias copper/zinc superoxide dismutase 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IDA Interproscan
MF GO:0004784 superoxide dismutase activity TAS Interproscan
MF GO:0005507 copper ion binding IBA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005576 extracellular region IBA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005737 cytoplasm NAS Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005829 cytosol TAS Interproscan
BP GO:0006094 gluconeogenesis RCA Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006979 response to oxidative stress IEP Interproscan
BP GO:0006979 response to oxidative stress TAS Interproscan
MF GO:0008270 zinc ion binding IBA Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0010039 response to iron ion IEP Interproscan
BP GO:0010193 response to ozone IEP Interproscan
BP GO:0019430 removal of superoxide radicals IBA Interproscan
BP GO:0019430 removal of superoxide radicals IC Interproscan
BP GO:0034599 cellular response to oxidative stress IEP Interproscan
BP GO:0035195 gene silencing by miRNA IEP Interproscan
BP GO:0042742 defense response to bacterium IEP Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
BP GO:0046688 response to copper ion IEP Interproscan
BP GO:0071280 cellular response to copper ion IEP Interproscan
BP GO:0071329 cellular response to sucrose stimulus IEP Interproscan
BP GO:0071457 cellular response to ozone IEP Interproscan
BP GO:0071472 cellular response to salt stress IEP Interproscan
BP GO:0071484 cellular response to light intensity IEP Interproscan
BP GO:0071493 cellular response to UV-B IEP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001424 SOD_Cu_Zn_dom 12 148
No external refs found!