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Nbi_g13695


Description : E3 ubiquitin ligase *(SINA) & original description: none


Gene families : OG0000462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13695

Target Alias Description ECC score Gene Family Method Actions
AT1G66650 No alias Protein with RING/U-box and TRAF-like domains 0.03 OrthoFinder output from all 47 species
Aop_g04168 No alias E3 ubiquitin ligase *(SINA) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20220 No alias E3 ubiquitin ligase *(SINA) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g069880.4.1 Solyc02g069880 SINA-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 120 275
No external refs found!