AT1G65060 (4CL3)

Aliases : 4CL3

Description : 4-coumarate:CoA ligase 3

Gene families : OG_01_0000958 (Gene family) Phylogenetic Tree(s): OG0000958_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT1G65060
Cluster	HCCA cluster: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01024400001	No alias	No description available	0.04	Gene family
LOC_Os02g46970	Os02g0697400	No description available	0.03	Gene family
Solyc03g097030.3.1	Solyc03g097030.3	No description available	0.08	Gene family
Zm00001d051529	GRMZM2G054013	No description available	0.03	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	ND	Arabidopsis.org
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	IEP	Arabidopsis.org
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009698	phenylpropanoid metabolic process	TAS	Arabidopsis.org
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	RCA	Arabidopsis.org
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Arabidopsis.org
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	RCA	Arabidopsis.org
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010208	pollen wall assembly	None	Extended
BP	GO:0010224	response to UV-B	RCA	Arabidopsis.org
BP	GO:0010584	pollen exine formation	IMP	Arabidopsis.org
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016207	4-coumarate-CoA ligase activity	IDA	Arabidopsis.org
MF	GO:0016405	CoA-ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	None	Extended
MF	GO:0016878	acid-thiol ligase activity	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046283	anthocyanin-containing compound metabolic process	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000873	AMP-dep_Synth/Lig	62	466
IPR025110	AMP-bd_C	475	550

External Links

No external refs found!

AT1G65060 (4CL3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation