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  5. Nbi_g13629

Nbi_g13629


Description : not classified & original description: none


Gene families : OG0002452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13629

Target Alias Description ECC score Gene Family Method Actions
Dcu_g23957 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_29807 No alias C2 and GRAM domain-containing protein At1g03370... 0.08 OrthoFinder output from all 47 species
LOC_Os06g19400.1 LOC_Os06g19400 C2 and GRAM domain-containing protein At1g03370... 0.02 OrthoFinder output from all 47 species
Mp4g06300.1 No alias C2 and GRAM domain-containing protein At1g03370... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0094.g019154 No alias not classified & original description: CDS=1-3057 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR031968 VASt 892 1030
IPR031968 VASt 279 422
IPR000008 C2_dom 562 663
IPR000008 C2_dom 2 101
IPR004182 GRAM 716 780
No external refs found!