AT1G64230 (UBC28)


Aliases : UBC28

Description : ubiquitin-conjugating enzyme 28


Gene families : OG_01_0000315 (Gene family) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G64230
Cluster HCCA cluster: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cre16.g693700 No alias 29.5.11.3 protein.degradation.ubiquitin.E2... 0.01 Gene family
GSVIVT01014758001 No alias 29.5.11.3 protein.degradation.ubiquitin.E2... 0.03 Gene family
GSVIVT01019484001 No alias 29.5.11.3 protein.degradation.ubiquitin.E2... 0.02 Gene family
GSVIVT01024027001 No alias 29.5.11.3 protein.degradation.ubiquitin.E2... 0.02 Gene family
GSVIVT01024546001 No alias 29.5.11.3 protein.degradation.ubiquitin.E2... 0.02 Gene family
GSVIVT01025872001 No alias 29.5.11.3 protein.degradation.ubiquitin.E2... 0.03 Gene family
GSVIVT01027045001 No alias 29.5.11.3 protein.degradation.ubiquitin.E2... 0.02 Gene family
LOC_Os04g57220 Os04g0667800 29.5.11.3 protein.degradation.ubiquitin.E2... 0.02 Gene family
Solyc06g007510.3.1 Solyc06g007510.3 29.5.11.3 protein.degradation.ubiquitin.E2... 0.04 Gene family
Solyc08g008220.3.1 Solyc08g008220.3 29.5.11.3 protein.degradation.ubiquitin.E2 Encodes a... 0.02 Gene family
Solyc12g056100.2.1 Solyc12g056100.2 29.5.11.3 protein.degradation.ubiquitin.E2... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Arabidopsis.org
MF GO:0004842 ubiquitin-protein transferase activity ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006301 postreplication repair RCA Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process IDA Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process RCA Arabidopsis.org
BP GO:0006635 fatty acid beta-oxidation RCA Arabidopsis.org
BP GO:0016558 protein import into peroxisome matrix RCA Arabidopsis.org
BP GO:0042023 DNA endoreduplication RCA Arabidopsis.org
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Arabidopsis.org
BP GO:0043248 proteasome assembly RCA Arabidopsis.org
BP GO:0044265 cellular macromolecule catabolic process RCA Arabidopsis.org
BP GO:0048193 Golgi vesicle transport RCA Arabidopsis.org
BP GO:0051510 regulation of unidimensional cell growth RCA Arabidopsis.org
BP GO:0051788 response to misfolded protein RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!