AT1G63680 (MURE, PDE316, ATMURE)


Aliases : MURE, PDE316, ATMURE

Description : acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases


Gene families : OG_01_0005143 (Gene family) Phylogenetic Tree(s): OG0005143_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G63680
Cluster HCCA cluster: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cre12.g519900 No alias 33.99 development.unspecified Encodes AtMurE, a homolog... 0.03 Gene family
GSVIVT01019746001 No alias 33.99 development.unspecified Encodes AtMurE, a homolog... 0.23 Gene family
MA_961480g0010 No alias 33.99 development.unspecified Encodes AtMurE, a homolog... 0.03 Gene family
Smo148635 PACid_15409337 No description available 0.03 Gene family
Solyc08g081170.3.1 Solyc08g081170.3 33.99 development.unspecified Encodes AtMurE, a homolog... 0.17 Gene family
Zm00001d047128 GRMZM2G009070 33.99 development.unspecified Encodes AtMurE, a homolog... 0.16 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006399 tRNA metabolic process RCA Arabidopsis.org
BP GO:0009058 biosynthetic process ISS Arabidopsis.org
CC GO:0009295 nucleoid IDA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
BP GO:0009658 chloroplast organization IMP Arabidopsis.org
BP GO:0009658 chloroplast organization RCA Arabidopsis.org
BP GO:0009902 chloroplast relocation RCA Arabidopsis.org
BP GO:0010020 chloroplast fission IMP Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
MF GO:0016874 ligase activity ISS Arabidopsis.org
BP GO:0034660 ncRNA metabolic process RCA Arabidopsis.org
BP GO:0042793 plastid transcription RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000713 Mur_ligase_N 264 337
IPR004101 Mur_ligase_C 577 660
IPR013221 Mur_ligase_cen 349 556
No external refs found!