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  5. Nbi_g13468

Nbi_g13468 (SAG18)


Aliases : SAG18

Description : not classified & original description: none


Gene families : OG0003107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13468
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Ehy_g07400 SAG18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_33669 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g11975 SAG18 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19621 SAG18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012217 SAG18 not classified & original description: CDS=813-1805 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
CC GO:0000120 RNA polymerase I transcription regulator complex IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!