AT1G62820


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0000164 (Gene family) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G62820
Cluster HCCA cluster: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000692.65 No alias 30.3 signalling.calcium encodes a calmodulin that is... 0.04 Gene family
Cpa|evm.model.tig00021435.44 No alias 30.3 signalling.calcium EF hand domain protein encodes a... 0.05 Gene family
Cpa|evm.model.tig00021435.47 No alias 30.3 signalling.calcium EF hand domain protein encodes a... 0.02 Gene family
Cre03.g150300 No alias 30.3 signalling.calcium Encodes a calmodulin isoform.... 0.08 Gene family
Cre03.g178150 No alias 30.3 signalling.calcium Encodes a calmodulin isoform.... 0.02 Gene family
GSVIVT01000380001 No alias 30.3 signalling.calcium EF hand domain protein encodes a... 0.04 Gene family
LOC_Os01g16240 Os01g0267900 30.3 signalling.calcium EF hand domain protein encodes a... 0.05 Gene family
LOC_Os01g17190 Os01g0279300 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
LOC_Os05g41210 Os05g0491100 30.3 signalling.calcium encodes a calmodulin that is... 0.07 Gene family
MA_10429336g0010 No alias 30.3 signalling.calcium EF hand domain protein encodes a... 0.02 Gene family
MA_15211g0010 No alias 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
MA_66144g0010 No alias 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
Smo141966 PACid_15413595 No description available 0.04 Gene family
Solyc01g008950.3.1 Solyc01g008950.3 30.3 signalling.calcium EF hand domain protein encodes a... 0.02 Gene family
Solyc03g098050.3.1 Solyc03g098050.3 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
Solyc11g072240.2.1 Solyc11g072240.2 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
Solyc11g072270.2.1 Solyc11g072270.2 29.4 protein.postranslational modification... 0.03 Gene family
Solyc12g099990.2.1 Solyc12g099990.2 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
Zm00001d007194 GRMZM2G395244 30.3 signalling.calcium EF hand domain protein encodes a... 0.04 Gene family
Zm00001d008278 GRMZM2G044963 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
Zm00001d010650 GRMZM2G004703 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005886 plasma membrane ISM Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 145
IPR002048 EF_hand_dom 14 42
No external refs found!