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  5. Nbi_g13409

Nbi_g13409


Description : not classified & original description: none


Gene families : OG0001957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001957_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13409

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00170680 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G10220 No alias BEST Arabidopsis thaliana protein match is: ZCF37... 0.03 OrthoFinder output from all 47 species
Ceric.14G036200.1 Ceric.14G036200 not classified & original description: pacid=50634867... 0.05 OrthoFinder output from all 47 species
Ceric.29G056300.1 Ceric.29G056300 not classified & original description: pacid=50625810... 0.06 OrthoFinder output from all 47 species
Ceric.29G056800.1 Ceric.29G056800 not classified & original description: pacid=50625138... 0.04 OrthoFinder output from all 47 species
Dac_g08892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08686 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g46743 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00500 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
LOC_Os03g31740.1 ZCF37, LOC_Os03g31740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10427108g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_10435417g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_2009g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_7257095g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_88586g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g18502 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g18503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23874 ZCF37 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g09556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55624 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g15402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002093_P001 ZCF37, Zm00001e002093 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035399_P001 Zm00001e035399 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!