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  5. Nbi_g13256

Nbi_g13256


Description : 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) & original description: none


Gene families : OG0007059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13256
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00096400 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
Adi_g013357 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.07 OrthoFinder output from all 47 species
Aop_g07470 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene40852.t1 Aspi01Gene40852 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.04 OrthoFinder output from all 47 species
Dac_g13806 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.07 OrthoFinder output from all 47 species
Dde_g11978 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.03 OrthoFinder output from all 47 species
Gb_34355 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.02 OrthoFinder output from all 47 species
LOC_Os04g25400.2 LOC_Os04g25400 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 OrthoFinder output from all 47 species
MA_6348739g0010 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 OrthoFinder output from all 47 species
MA_732747g0010 No alias 7-hydroxymethyl chlorophyll a reductase, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_9928769g0020 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 OrthoFinder output from all 47 species
Msp_g27369 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.04 OrthoFinder output from all 47 species
Solyc09g091100.4.1 Solyc09g091100 7-hydroxymethyl chlorophyll(ide) a reductase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007525 FrhB_FdhB_C 225 377
IPR007516 Co_F420_Hydgase/DH_bsu_N 141 216
No external refs found!