AT1G60850 (ATRPAC42, AAC42)


Aliases : ATRPAC42, AAC42

Description : DNA-directed RNA polymerase family protein


Gene families : OG_01_0004526 (Gene family) Phylogenetic Tree(s): OG0004526_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G60850
Cluster HCCA cluster: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cre07.g313302 No alias 27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43) 0.05 Gene family
Smo409226 PACid_15423126 27.2 RNA.transcription RNA polymerase I subunit 43... 0.03 Gene family
Solyc12g015780.2.1 Solyc12g015780.2 27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43) 0.06 Gene family
Zm00001d054013 GRMZM2G025356 27.2 RNA.transcription RNA polymerase I subunit 43 (RPAC43) 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
BP GO:0006351 transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011262 DNA-dir_RNA_pol_insert 117 261
IPR011263 DNA-dir_RNA_pol_RpoA/D/Rpb3 87 369
No external refs found!