Nbi_g13207

Description : ABC-G-type lipid transporter *(STR) & original description: none

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g13207

Target	Alias	Description	ECC score	Gene Family Method
AT5G19410	No alias	ABC-2 type transporter family protein	0.02	OrthoFinder output from all 47 species
GSVIVT01014222001	No alias	ABC transporter G family member 10 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01037274001	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
LOC_Os03g17350.1	LOC_Os03g17350	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Mp1g25240.1	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Pp3c8_17020V3.1	Pp3c8_17020	ABC-2 type transporter family protein	0.01	OrthoFinder output from all 47 species
Solyc03g113690.1.1	Solyc03g113690	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Spa_g37465	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e001269_P001	Zm00001e001269	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e031556_P001	Zm00001e031556	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	315	372
IPR013525	ABC_2_trans	561	769
IPR003439	ABC_transporter-like_ATP-bd	135	286

External Links

No external refs found!