AT1G60360


Description : RING/U-box superfamily protein


Gene families : OG_01_0000020 (Gene family) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G60360
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G18770 No alias RING/U-box superfamily protein 0.04 Gene family
AT3G51325 No alias RING/U-box superfamily protein 0.03 Gene family
GSVIVT01020763001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.16 Gene family
GSVIVT01022971001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
GSVIVT01022973001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.21 Gene family
LOC_Os01g44240 Os01g0633300 No description available 0.02 Gene family
LOC_Os02g52870 Os02g0767600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
LOC_Os12g02620 Os12g0118700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
MA_10427259g0010 No alias 17.1.2 hormone metabolism.abscisic acid.signal... 0.02 Gene family
MA_281830g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_289134g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_433917g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_76949g0010 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family
MA_816375g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
Solyc01g104260.3.1 Solyc01g104260.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.19 Gene family
Solyc09g074460.2.1 Solyc09g074460.2 31.1 cell.organisation Encodes a RING-H2 protein that... 0.02 Gene family
Solyc11g012950.2.1 Solyc11g012950.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d018190 GRMZM2G021480 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.08 Gene family
Zm00001d018393 GRMZM2G467756 No description available 0.02 Gene family
Zm00001d037167 GRMZM2G142816 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.18 Gene family
Zm00001d052154 GRMZM2G473016 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 223 265
IPR039525 RNF126-like_zinc-ribbon 24 56
No external refs found!