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Nbi_g13133 (ATHMG, HMG, SSRP1, NFD)


Aliases : ATHMG, HMG, SSRP1, NFD

Description : component *(SSRP) of FACT histone chaperone complex & original description: none


Gene families : OG0003187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13133

Target Alias Description ECC score Gene Family Method Actions
AT3G28730 ATHMG, HMG, SSRP1, NFD high mobility group 0.03 OrthoFinder output from all 47 species
Adi_g024932 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s2556.g112165 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Cba_g04637 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g06083 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
MA_9821235g0010 ATHMG, HMG, SSRP1, NFD component SSRP of FACT histone chaperone complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR024954 SSRP1_DD 108 177
IPR013719 RTT106/SPT16-like_middle_dom 352 443
IPR035417 SSRP1/POB3_N 8 98
IPR009071 HMG_box_dom 566 634
No external refs found!