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  5. Nbi_g13088

Nbi_g13088


Description : not classified & original description: none


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13088
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Adi_g008654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16447 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Lfl_g01694 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Lfl_g11221 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008019 No alias not classified & original description: CDS=1-1290 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011548 No alias not classified & original description: CDS=1-762 0.02 OrthoFinder output from all 47 species
Spa_g09193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 142 190
No external refs found!