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  5. AT1G08190

AT1G08190 (ATVPS41, ATVAM2,...)


Aliases : ATVPS41, ATVAM2, VPS41, ZIP2, VAM2

Description : vacuolar protein sorting 41


Gene families : OG_01_0004516 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004516_tree ,
OG_02_0007366 (LandPlants) Phylogenetic Tree(s): OG_02_0007366_tree ,
OG_03_0006785 (SeedPlants) Phylogenetic Tree(s): OG_03_0006785_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G08190
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031443001 No alias Vesicle trafficking.target membrane... 0.04 Archaeplastida
Gb_33564 No alias HOPS-specific component VPS41/VAM2 of HOPS/CORVET... 0.02 Archaeplastida
Zm00001e006564_P001 No alias HOPS-specific component VPS41/VAM2 of HOPS/CORVET... 0.04 Archaeplastida
Gb_33564 No alias HOPS-specific component VPS41/VAM2 of HOPS/CORVET... 0.02 LandPlants
Zm00001e006564_P001 No alias HOPS-specific component VPS41/VAM2 of HOPS/CORVET... 0.04 LandPlants
Solyc06g074740.3.1 No alias HOPS-specific component VPS41/VAM2 of HOPS/CORVET... 0.02 SeedPlants
Zm00001e006564_P001 No alias HOPS-specific component VPS41/VAM2 of HOPS/CORVET... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006623 protein targeting to vacuole TAS Interproscan
BP GO:0009630 gravitropism IMP Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 635 765
No external refs found!