AT1G08170

Description : Histone superfamily protein

Gene families : OG_01_0000186 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000186_tree ,
OG_02_0047130 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0041870 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G08170
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01031447001	No alias	Chromatin organisation.histones.H2B-type histone	0.02	Archaeplastida
Zm00001e009466_P001	No alias	histone (H2B)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	89	214

External Links

No external refs found!

AT1G08170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation