AT1G57720


Description : Translation elongation factor EF1B, gamma chain


Gene families : OG_01_0003484 (Gene family) Phylogenetic Tree(s): OG0003484_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G57720
Cluster HCCA cluster: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000829.21 No alias 29.2.4 protein.synthesis.elongation Translation... 0.04 Gene family
LOC_Os02g12800 Os02g0220600 29.2.4 protein.synthesis.elongation Translation... 0.06 Gene family
LOC_Os06g37440 Os06g0571400 29.2.4 protein.synthesis.elongation Translation... 0.02 Gene family
Solyc06g011280.3.1 Solyc06g011280.3 29.2.4 protein.synthesis.elongation Translation... 0.08 Gene family
Zm00001d016358 GRMZM2G029559 29.2.4 protein.synthesis.elongation Translation... 0.1 Gene family
Zm00001d036959 GRMZM2G122871 29.2.4 protein.synthesis.elongation Translation... 0.08 Gene family
Zm00001d046352 GRMZM2G059580 29.2.4 protein.synthesis.elongation Translation... 0.11 Gene family

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity ISS Arabidopsis.org
MF GO:0005507 copper ion binding IDA Arabidopsis.org
CC GO:0005618 cell wall IDA Arabidopsis.org
CC GO:0005773 vacuole IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0010043 response to zinc ion IEP Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
BP GO:0046686 response to cadmium ion IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 8 76
IPR001662 EF1B_G_C 252 359
IPR004046 GST_C 121 197
No external refs found!